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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015846477.1_cds_XP_016509656.1_22570
CDS Infomation

[gene=LOC107827110] [db_xref=GeneID:107827110] [protein=V-type proton ATPase catalytic subunit A-like] [protein_id=XP_016509656.1] [location=complement(join(14829..14943,15083..15171,15427..15505,15588..15685,16494..16598,16686..16772,16854..17048,18107..18213,18379..18511,18589..18651,18767..18868,18987..19058,19164..19220,19707..19808,19931..19968,20061..20172,20307..20363,20463..20518,20669..20795,21524..21601))] [gbkey=CDS]
Sequence

ATGCCGTCACTCTTCGGAGGTCCTATGACTACTTTTGAGGATTCTGAGAAGGAAAGCGAG
TATGGCTACGTCAGAAAGGTGTCTGGACCAGTGGTTGTTGCTGATGGAATGGCAGGGGCT
GCCATGTATGAACTAGTTCGTGTCGGGCATGACAATCTCATTGGTGAAATCATTAGGCTG
GAAGGAGATTCTGCTACAATTCAGGTCTATGAAGAAACAGCTGGTCTGATGGTGAATGAT
CCTGTGCTACGTACACGCAAGCCCCTGTCAGTAGAGCTGGGTCCTGGAATATTGGGAAAC
ATCTTCGATGGTATTCAGAGGCCTCTGAAGACAATTGCAAAAAGGTCCGGTGATGTCTAC
ATCCCTCGAGGTGTATCTGTTCCGGCCTTGGACAAGGACATACTATGGGAATTTCAGCCT
AAGAAAATAGGTGAGGGAGATCTCTTAACAGGTGGAGATTTGTATGCTACTGTCTTTGAG
AACACCTTAATGGAACATCGTGTTGCTCTTCCTCCTGATGCCATGGGAAAGATTACTTAC
ATTGCTCCAGCTGGTCACTACTCTTTGAATGATACTGTTCTTGAGCTTGAGTTTCAAGGC
GTCAAAAAGCAAGTGACTATGCTTCAGACTTGGCCTGTGCGTACTCCTAGGCCTGTTGCA
TCAAAGTTAGCTGCTGATACTCCACTTCTTACTGGACAGCGTGTTCTGGATGCCCTGTTC
CCCTCAGTGCTTGGTGGTACTTGTGCCATACCTGGTGCTTTTGGCTGTGGGAAGACAGTG
ATTAGTCAAGCTCTTTCCAAGTACTCTAACTCGGACACTGTCGTGTATGTTGGTTGTGGA
GAAAGAGGAAACGAAATGGCAGAGGTACTTATGGATTTCCCTCAATTGACAATGACATTG
CCTGATGGGCGTGAAGAGTCTGTCATGAAACGTACCACACTTGTGGCTAATACTTCAAAC
ATGCCTGTGGCTGCTCGTGAGGCCTCAATCTATACAGGTATTACTATAGCAGAATACTTC
AGAGACATGGGTTATAATGTCAGTATGATGGCAGATTCGACATCTCGTTGGGCAGAAGCT
TTACGTGAAATCTCAGGTCGATTGGCTGAGATGCCTGCAGACAGTGGATATCCTGCTTAT
TTGGCAGCACGTTTGGCATCTTTCTATGAGCGTGCTGGTAAAGTCAAGTGTCTTGGTGGA
CCAGAGAGAACTGGTAGTGTGACTATTGTTGGTGCTGTTTCTCCTCCAGGAGGAGATTTC
TCAGATCCTGTTACATCTGCAACCCTCGGTATTGTTCAGGTCTTCTGGGGTCTGGATAAG
AAATTGGCTCAAAGGAAACACTTTCCCTCTGTAAATTGGCTTATTTCCTATTCGAAATAC
TCTGGGGCACTAGAGTCCTTTTATGAGAAGTTTGATGCTGATTTTATTGACATAAGGACA
AAAGCCCGTGAGGTGCTGCAGAGGGAGGATGACCTAAATGAAATTGTTCAACTTGTCGGA
AAGGATGCTTTAGCTGAAACAGATAAGATTACCTTGGAAACTGCAAAGCTTTTAAGGGAG
GACTACCTTGCACAAAATGCTTTTACACCATATGATAAGTTCTGCCCTTTCTACAAATCT
GTTTGGATGTTGCGCAACATTATCCACTTCTATAACTTGGCTAACCAGGCTGTTGAACGA
GGAGCTGGTATGGATGGACAGAAAATTACTTACACTCTCATTAAGCACCGTTTAGGAGAT
TTATTCTACCGTTTGGTGTCCCAAAAGTTCGAGGATCCAGCAGAAGGCGAAGACGTTCTG
GTGGGCAAGTTTAAGAAGCTTCATGATGATTTGACTGCTGGTTTCCGCAACCTTGAGGAT
GAGACTCGATAA

Peptide Sequence

PEP ID

XP_016509656.1
PEP Infomation

PREDICTED: V-type proton ATPase catalytic subunit A-like [Nicotiana tabacum]
Sequence

MPSLFGGPMTTFEDSEKESEYGYVRKVSGPVVVADGMAGAAMYELVRVGHDNLIGEIIRL
EGDSATIQVYEETAGLMVNDPVLRTRKPLSVELGPGILGNIFDGIQRPLKTIAKRSGDVY
IPRGVSVPALDKDILWEFQPKKIGEGDLLTGGDLYATVFENTLMEHRVALPPDAMGKITY
IAPAGHYSLNDTVLELEFQGVKKQVTMLQTWPVRTPRPVASKLAADTPLLTGQRVLDALF
PSVLGGTCAIPGAFGCGKTVISQALSKYSNSDTVVYVGCGERGNEMAEVLMDFPQLTMTL
PDGREESVMKRTTLVANTSNMPVAAREASIYTGITIAEYFRDMGYNVSMMADSTSRWAEA
LREISGRLAEMPADSGYPAYLAARLASFYERAGKVKCLGGPERTGSVTIVGAVSPPGGDF
SDPVTSATLGIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSGALESFYEKFDADFIDIRT
KAREVLQREDDLNEIVQLVGKDALAETDKITLETAKLLREDYLAQNAFTPYDKFCPFYKS
VWMLRNIIHFYNLANQAVERGAGMDGQKITYTLIKHRLGDLFYRLVSQKFEDPAEGEDVL
VGKFKKLHDDLTAGFRNLEDETR

Transcript Sequence

Gene sequence data has not been registered.